STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRG1LTumor protein p63 regulated 1 like. (77 aa)    
Predicted Functional Partners:
ABCF1
ATP binding cassette subfamily F member 1.
   
  
 0.805
DDX5
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.749
SRSF2
Serine and arginine rich splicing factor 2.
   
 
 0.689
HAPLN4
Hyaluronan and proteoglycan link protein 4.
      
 0.608
DROSHA
Drosha ribonuclease III.
      
 0.564
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 
 0.558
SRSF9
Serine and arginine rich splicing factor 9.
   
 
 0.552
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.552
SLC26A1
Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.548
DDX51
DEAD-box helicase 51; Belongs to the DEAD box helicase family.
   
 
 0.527
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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