STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPDC1Neural proliferation, differentiation and control 1. (365 aa)    
Predicted Functional Partners:
PPP1R18
Protein phosphatase 1 regulatory subunit 18.
      
 0.647
CARNS1
Carnosine synthase 1.
      
 0.647
LOC489841
Uncharacterized protein.
    
 0.624
RPS6KB2
Non-specific serine/threonine protein kinase.
   
  
 0.524
MAPRE3
Microtubule associated protein RP/EB family member 3.
   
  
 0.521
RPH3A
Rabphilin 3A.
      
 0.515
PHF3
PHD finger protein 3.
      
 0.510
MCHR1
Melanin concentrating hormone receptor 1.
      
 0.493
RAB3IP
RAB3A interacting protein.
   
  
 0.485
GTF2F2
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
      
 0.483
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.