STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL6RAB, member RAS oncogene family like 6. (865 aa)    
Predicted Functional Partners:
CCDC138
Coiled-coil domain containing 138.
      
 0.774
CCDC186
Coiled-coil domain containing 186.
    
 
 0.745
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
   
 
 0.716
VPS33B
VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.714
VPS33A
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.705
DPP7
Dipeptidyl peptidase 7.
   
  
 0.672
RAB3IP
RAB3A interacting protein.
    
 
 0.644
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 
 0.600
TRAPPC8
Trafficking protein particle complex 8.
    
 
 0.584
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
  
 0.573
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.