STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL28Mitochondrial ribosomal protein L28. (317 aa)    
Predicted Functional Partners:
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.984
MRPL15
Mitochondrial ribosomal protein L15.
   
   0.972
MRPL9
RIBOSOMAL_L9 domain-containing protein.
   
   0.972
ENSCAFP00000046096
RIBOSOMAL_L9 domain-containing protein.
   
   0.971
ENSCAFP00000048424
Ribosomal_L18e/L15P domain-containing protein.
   
   0.971
MRPS26
Mitochondrial ribosomal protein S26.
   
 
 0.958
GADD45GIP1
GADD45G interacting protein 1.
   
   0.952
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.946
MRPL41
Mitochondrial ribosomal protein L41.
   
   0.941
AURKAIP1
Aurora kinase A interacting protein 1.
   
   0.932
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.