STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACFD1Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
MINDY2
MINDY lysine 48 deubiquitinase 2.
      
 0.502
FAM163A
Family with sequence similarity 163 member A.
      
 0.495
RABAC1
Prenylated Rab acceptor protein 1; General Rab protein regulator required for vesicle formation from the Golgi complex. May control vesicle docking and fusion by mediating the action of Rab GTPases to the SNARE complexes. In addition it inhibits the removal of Rab GTPases from the membrane by GDI1.
   
  
 0.489
MINDY1
MINDY lysine 48 deubiquitinase 1.
      
 0.468
FAM118A
Family with sequence similarity 118 member A.
      
 0.457
KLHDC3
Kelch domain containing 3.
      
 0.457
SESTD1
SEC14 and spectrin domain containing 1.
      
 0.457
MRFAP1
Uncharacterized protein.
      
 0.451
SHKBP1
SH3KBP1 binding protein 1.
      
 0.450
KCTD10
Potassium channel tetramerization domain containing 10.
      
 0.450
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.