STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX3PBX homeobox 3. (398 aa)    
Predicted Functional Partners:
HOXB1
Homeobox B1.
    
 
 0.708
HOXD9
Homeobox domain-containing protein.
    
 
 0.685
MEIS1
Meis homeobox 1.
   
 
0.682
HOXB5
Homeobox B5.
    
 
 0.678
MEIS2
Meis homeobox 2.
   
 
0.624
HOXB6
Homeobox B6.
    
 
 0.588
HOXB8
Homeobox B8.
    
 
 0.581
HOXC8
Homeobox C8.
   
 
 0.577
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.570
TOM1L2
Target of myb1 like 2 membrane trafficking protein.
   
  
 0.566
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.