STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED6GOLD domain-containing protein. (241 aa)    
Predicted Functional Partners:
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.947
CEP76
Spire type actin nucleation factor 1.
      
 0.923
QPCTL
Glutaminyl-peptide cyclotransferase like.
      
 0.908
COPZ2
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
      
 0.899
NIP7
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
  
 0.891
PDF
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
  
 0.883
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
   
  
 0.866
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.850
TRABD
TraB domain containing.
      
 0.765
UFM1
Ubiquitin fold modifier 1.
      
 0.746
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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