STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC160Coiled-coil domain containing 160. (364 aa)    
Predicted Functional Partners:
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.809
SQLE
Squalene epoxidase.
   
 0.695
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.694
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.683
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 
 0.680
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 
 0.675
EFHC2
EF-hand domain containing 2.
      
 0.662
MSMO1-2
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.603
FAXDC2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 0.603
ENSCAFP00000046576
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.603
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.