STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102153485RanBP2-type domain-containing protein. (391 aa)    
Predicted Functional Partners:
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.523
TEX29
Testis expressed 29.
   
  
 0.523
ZYG11A
Zyg-11 family member A, cell cycle regulator.
      
 0.515
TEX37
Testis expressed 37.
   
  
 0.513
ZNF142
Zinc finger protein 142.
      
 0.511
ZMYM6
Zinc finger MYM-type containing 6.
      
 0.491
TEX30
Testis expressed 30.
      
 0.487
TEX22
Testis expressed 22.
      
 0.487
TEX28
Testis expressed 28.
      
 0.483
TMCC1
Transmembrane and coiled-coil domain family 1.
      
 0.483
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.