STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2R8M3_CANLFUncharacterized protein. (157 aa)    
Predicted Functional Partners:
GTF2B
General transcription factor IIB.
   
 
 0.802
GTF2A1L
Uncharacterized protein.
   
 
 0.755
TAF11
TATA-box binding protein associated factor 11.
   
 
 0.688
GTF2E1
General transcription factor IIE subunit 1.
   
 
 0.681
WDR47
WD repeat domain 47.
   
 
 0.678
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
    
 
 0.676
TAF1
Transcription initiation factor TFIID subunit.
    
 
 0.675
TAF2
TATA-box binding protein associated factor 2.
    
 
 0.673
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 
 0.672
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
    
 
 0.665
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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