STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTCN1V-set domain containing T cell activation inhibitor 1. (282 aa)    
Predicted Functional Partners:
VPS36
Vacuolar protein sorting 36 homolog.
    
 
 0.675
LOC611565
Uncharacterized protein.
   
 
 0.579
HELZ2
Helicase with zinc finger 2.
      
 0.561
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
   
  
 0.560
CHMP3
Uncharacterized protein.
      
 0.536
TRIL
TLR4 interactor with leucine rich repeats.
    
 
 0.527
BBOX1
Gamma-butyrobetaine hydroxylase 1.
   
  
 0.518
J9NT78_CANLF
Ig-like domain-containing protein.
      
 0.506
PDCD1LG2
Programmed cell death 1 ligand 2.
   
  
 0.502
KIF26B
Kinesin family member 26B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.501
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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