STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP6Receptor expression-enhancing protein. (180 aa)    
Predicted Functional Partners:
RP1L1
RP1 like 1.
      
 0.749
SNX15
Sorting nexin 15.
    
   0.733
RHBDD3
Rhomboid domain containing 3.
      
 0.709
FAM118A
Family with sequence similarity 118 member A.
    
 
 0.704
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
      
 0.680
TMEM39B
Transmembrane protein 39B.
      
 0.680
PSD2
Pleckstrin and Sec7 domain containing 2.
      
 0.679
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
   
  
 0.672
ANKRD33B
Ankyrin repeat domain 33B.
      
 0.647
PDE6B
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta; This protein participates in processes of transmission and amplification of the visual signal. Necessary for the formation of a functional phosphodiesterase holoenzyme; Belongs to the cyclic nucleotide phosphodiesterase family.
      
 0.637
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.