STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM6PR/SET domain 6. (499 aa)    
Predicted Functional Partners:
KMT5C
Lysine methyltransferase 5C.
      
 0.702
PRDM14
PR/SET domain 14.
    
 
0.683
ENSCAFP00000058971
Uncharacterized protein.
      
 0.619
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
    
 
 0.580
ZBED6CL
Dimer_Tnp_hAT domain-containing protein.
    
 
 0.570
NME6
Nucleoside diphosphate kinase.
      
 0.570
SMYD2
SET and MYND domain containing 2.
    
 
 0.521
CEP120
Centrosomal protein 120.
 
  
 
 0.519
KBTBD4
Kelch repeat and BTB domain containing 4.
      
 0.515
SASS6
SAS-6 centriolar assembly protein.
      
 0.504
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.