STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16H4orf47Chromosome 16 C4orf47 homolog. (310 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
      
 0.962
C9orf116
Chromosome 9 open reading frame 116.
      
 0.949
ARMC3
Armadillo repeat containing 3.
   
  
 0.935
IQUB
IQ motif and ubiquitin domain containing.
      
 0.923
C34H5orf49
Chromosome 34 C5orf49 homolog.
   
  
 0.784
CCDC96
Coiled-coil domain containing 96.
    
 
 0.723
LOC480351
Uncharacterized protein.
    
 
 0.608
CCDC170
Coiled-coil domain containing 170.
    
 
 0.608
DNAH11
Dynein axonemal heavy chain 11.
   
  
 0.527
GNB2
G protein subunit beta 2.
    
 
 0.524
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.