STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN1LAtaxin 1 like. (687 aa)    
Predicted Functional Partners:
ATXN1
Ataxin 1.
    
0.923
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.918
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.913
PUM1
Pumilio RNA binding family member 1.
     
 0.903
CIC
Capicua transcriptional repressor.
    
 
 0.722
BBX
BBX high mobility group box domain containing.
    
 
 0.528
EP400
E1A binding protein p400.
      
 0.517
OSER1
Oxidative stress responsive serine rich 1.
      
 0.515
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
      
 0.485
SERTAD3
SERTA domain containing 3.
   
  
 0.475
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.