STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C20orf27Chromosome 20 open reading frame 27. (197 aa)    
Predicted Functional Partners:
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
      
 0.637
SEC24C
SEC24 homolog C, COPII coat complex component.
   
 
 0.592
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
   
  
 0.567
HIP1R
Huntingtin interacting protein 1 related.
   
  
 0.542
PDLIM2
PDZ and LIM domain 2.
   
 
 0.518
CYFIP1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.461
SCRIB
Scribble planar cell polarity protein.
   
 
 0.417
ATG3
Autophagy-related protein 3.
   
  
 0.414
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.