STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEPP1DEPP1 autophagy regulator. (208 aa)    
Predicted Functional Partners:
CCDC171
Coiled-coil domain containing 171.
      
 0.757
WDR38
WD repeat domain 38.
      
 0.563
AFAP1L2
Actin filament associated protein 1 like 2.
   
  
 0.534
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
   
  
 0.491
SIGLEC15
Sialic acid binding Ig like lectin 15.
      
 0.482
DPEP1
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
   
  
 0.427
CRNN
Cornulin.
      
 0.426
FLRT3
Fibronectin leucine rich transmembrane protein 3.
      
 0.407
ENSCAFP00000051866
Uncharacterized protein.
      
 0.407
PLA1A
Phospholipase A1 member A.
      
 0.407
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.