STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF1Protein YIPF. (322 aa)    
Predicted Functional Partners:
YIPF4
Protein YIPF.
   
 
 0.796
YIPF6
Protein YIPF.
   
 
 0.794
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
  
 0.723
YIPF5
Protein YIPF.
   
 
 0.704
STK32C
Serine/threonine kinase 32C.
   
  
 0.534
CDRT4
CMT1A duplicated region transcript 4.
   
 
 0.518
TVP23B
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.518
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.518
ECD
Ecdysoneless cell cycle regulator.
   
  
 0.506
DHX33
DEAH-box helicase 33.
      
 0.501
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.