STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1BZinc finger C2HC-type containing 1B. (218 aa)    
Predicted Functional Partners:
FAM163B
Family with sequence similarity 163 member B.
      
 0.702
ZDHHC22
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.680
SEC22C
SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family.
      
 0.677
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
      
 0.571
LTV1
LTV1 ribosome biogenesis factor.
 
    
 0.493
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 
 0.490
THNSL2
Threonine synthase like 2.
      
 0.450
GLS2
Glutaminase 2.
      
 0.407
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.