STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM43AFamily with sequence similarity 43 member A. (397 aa)    
Predicted Functional Partners:
SCLY
Selenocysteine lyase.
      
 0.669
FAM13A
Family with sequence similarity 13 member A.
      
 0.650
GPR12
G protein-coupled receptor 12; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.623
LOC102154527
NTR domain-containing protein.
      
 0.526
TENT5B
Terminal nucleotidyltransferase 5B.
      
 0.517
TENT5C
Terminal nucleotidyltransferase 5C.
      
 0.515
XXYLT1
Xyloside xylosyltransferase 1.
      
 0.515
GAN
Gigaxonin.
      
 0.515
MUL1
Mitochondrial E3 ubiquitin protein ligase 1.
      
 0.511
NEURL3
Neuralized E3 ubiquitin protein ligase 3.
      
 0.509
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.