STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLFM4Olfactomedin 4. (494 aa)    
Predicted Functional Partners:
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 
 0.923
ASCL2
Achaete-scute family bHLH transcription factor 2.
   
  
 0.886
SMOC2
SPARC related modular calcium binding 2.
      
 0.765
BMI1
RING-type domain-containing protein.
      
 0.748
ENSCAFP00000052223
Uncharacterized protein.
      
 0.746
LRIG1
Leucine rich repeats and immunoglobulin like domains 1.
    
 
 0.736
AXIN2
Axin 2.
      
 0.706
MSI1
Musashi RNA binding protein 1.
      
 0.676
HOPX
HOP homeobox.
      
 0.667
CLCA4
Chloride channel accessory 4.
  
  
 0.593
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.