Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPSF1 | CPSF2 | ENSCAFP00000040297 | ENSCAFP00000016090 | Cleavage and polyadenylation specific factor 1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.999 |
CPSF1 | CPSF6 | ENSCAFP00000040297 | ENSCAFP00000000616 | Cleavage and polyadenylation specific factor 1. | Cleavage and polyadenylation specific factor 6. | 0.837 |
CPSF1 | CPSF7 | ENSCAFP00000040297 | ENSCAFP00000034025 | Cleavage and polyadenylation specific factor 1. | Cleavage and polyadenylation specific factor 7. | 0.845 |
CPSF1 | CSTF1 | ENSCAFP00000040297 | ENSCAFP00000017538 | Cleavage and polyadenylation specific factor 1. | Cleavage stimulation factor subunit 1. | 0.957 |
CPSF1 | CSTF2 | ENSCAFP00000040297 | ENSCAFP00000025876 | Cleavage and polyadenylation specific factor 1. | Cleavage stimulation factor subunit 2. | 0.982 |
CPSF1 | CSTF2T | ENSCAFP00000040297 | ENSCAFP00000042214 | Cleavage and polyadenylation specific factor 1. | RRM domain-containing protein. | 0.981 |
CPSF1 | CSTF3 | ENSCAFP00000040297 | ENSCAFP00000010810 | Cleavage and polyadenylation specific factor 1. | Cleavage stimulation factor subunit 3. | 0.996 |
CPSF1 | NUDT21 | ENSCAFP00000040297 | ENSCAFP00000031007 | Cleavage and polyadenylation specific factor 1. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.685 |
CPSF1 | PCF11 | ENSCAFP00000040297 | ENSCAFP00000006880 | Cleavage and polyadenylation specific factor 1. | PCF11 cleavage and polyadenylation factor subunit. | 0.993 |
CPSF1 | WDR33 | ENSCAFP00000040297 | ENSCAFP00000006428 | Cleavage and polyadenylation specific factor 1. | WD repeat domain 33. | 0.999 |
CPSF2 | CPSF1 | ENSCAFP00000016090 | ENSCAFP00000040297 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage and polyadenylation specific factor 1. | 0.999 |
CPSF2 | CPSF6 | ENSCAFP00000016090 | ENSCAFP00000000616 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage and polyadenylation specific factor 6. | 0.840 |
CPSF2 | CPSF7 | ENSCAFP00000016090 | ENSCAFP00000034025 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage and polyadenylation specific factor 7. | 0.884 |
CPSF2 | CSTF1 | ENSCAFP00000016090 | ENSCAFP00000017538 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage stimulation factor subunit 1. | 0.994 |
CPSF2 | CSTF2 | ENSCAFP00000016090 | ENSCAFP00000025876 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage stimulation factor subunit 2. | 0.982 |
CPSF2 | CSTF2T | ENSCAFP00000016090 | ENSCAFP00000042214 | Cleavage and polyadenylation specificity factor subunit 2. | RRM domain-containing protein. | 0.980 |
CPSF2 | CSTF3 | ENSCAFP00000016090 | ENSCAFP00000010810 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage stimulation factor subunit 3. | 0.981 |
CPSF2 | NUDT21 | ENSCAFP00000016090 | ENSCAFP00000031007 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.708 |
CPSF2 | PCF11 | ENSCAFP00000016090 | ENSCAFP00000006880 | Cleavage and polyadenylation specificity factor subunit 2. | PCF11 cleavage and polyadenylation factor subunit. | 0.996 |
CPSF2 | WDR33 | ENSCAFP00000016090 | ENSCAFP00000006428 | Cleavage and polyadenylation specificity factor subunit 2. | WD repeat domain 33. | 0.999 |
page 1 of 6