STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2RGA7_CANLFUncharacterized protein. (343 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
    
 
 0.880
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 
 0.874
SF3B2
Splicing factor 3b subunit 2.
    
 
 0.872
CWC27
CWC27 spliceosome associated cyclophilin.
   
 
 0.832
CWC22
CWC22 spliceosome associated protein homolog.
    
 
 0.832
DHX16
DEAH-box helicase 16.
   
 
 0.826
SF3A2
Splicing factor 3a subunit 2.
    
 
 0.824
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.821
BUD13
BUD13 homolog.
    
 
 0.813
SF3B1
Splicing factor 3b subunit 1.
    
 
 0.808
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.