STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM42Tripartite motif containing 42. (724 aa)    
Predicted Functional Partners:
TRIM47
Tripartite motif containing 47.
      
 0.756
TRIM69
Tripartite motif containing 69.
   
  
 0.706
TRIM65
Tripartite motif containing 65.
   
  
 0.693
TRIM66
Tripartite motif containing 66.
   
  
 0.687
TRIM23
Tripartite motif containing 23.
    
 
 0.686
TRIM41
Tripartite motif containing 41.
   
  
 0.682
TRIM4
Tripartite motif containing 4.
      
 0.679
PSMD8
Proteasome 26S subunit, non-ATPase 8.
      
 0.614
C28H10orf120
Chromosome 28 C10orf120 homolog.
   
  
 0.597
SAXO1
Stabilizer of axonemal microtubules 1.
   
 
 0.588
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.