STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCERG1Transcription elongation regulator 1. (1112 aa)    
Predicted Functional Partners:
MFAP1
Microfibril associated protein 1.
   
 0.975
PRPF38A
Pre-mRNA processing factor 38A.
   
 0.971
RBM25
RNA binding motif protein 25.
   
 
 0.965
ZMAT2
Zinc finger matrin-type 2.
   
  0.962
PRPF4B
Pre-mRNA processing factor 4B.
   
 0.943
SRRM1
PWI domain-containing protein.
   
 0.933
DDX46
DEAD-box helicase 46.
   
 
 0.916
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.884
RBM22
RNA binding motif protein 22.
   
 
 0.879
SNW1
SNW domain containing 1.
   
 
 0.879
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.