STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPSECSO-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. (496 aa)    
Predicted Functional Partners:
PSTK
Phosphoseryl-tRNA kinase.
   
 
 0.985
SEPHS1
Selenophosphate synthetase 1.
   
 
 0.974
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
      
 0.856
SARS1
Seryl-tRNA synthetase.
  
  
 0.846
SCLY
Selenocysteine lyase.
   
  
 0.824
ENSCAFP00000049781
Uncharacterized protein.
     
 0.750
CKS2
SECIS binding protein 2.
   
  
 0.663
TXNRD1
Thioredoxin reductase 1; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 
 0.639
SELENOF
Sep15_SelM domain-containing protein.
   
  
 0.632
TXNRD3
Thioredoxin reductase 3.
   
 
 0.613
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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