STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC13Zinc finger CCHC-type containing 13. (171 aa)    
Predicted Functional Partners:
CHIC1
Cysteine rich hydrophobic domain 1.
      
 0.724
NAP1L2
Nucleosome assembly protein 1 like 2; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.689
RLIM
Ring finger protein, LIM domain interacting.
    
 
 0.677
ZCCHC9
Zinc finger CCHC-type containing 9.
      
 0.650
LARP1B
La ribonucleoprotein domain family member 1B.
   
 
 0.593
POT1
Protection of telomeres 1.
      
 0.573
CDX4
Caudal type homeobox 4.
    
 
 0.560
PLSCR5
Phospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family.
    
 
 0.547
PLSCR3
Phospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family.
    
 
 0.520
PSMC3IP
PSMC3 interacting protein.
    
 
 0.514
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.