STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMX1BLIM homeobox transcription factor 1 beta. (373 aa)    
Predicted Functional Partners:
FOXA2
Forkhead box A2.
   
 
 0.684
PAX2
Paired box 2.
    
 
 0.676
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 
 0.630
OTX2
Orthodenticle homeobox 2.
    
 
0.621
PODXL2
Podocalyxin like 2.
      
 0.599
TLX3
T cell leukemia homeobox 3.
   
 
 0.597
LDB1
LIM domain binding 1.
    
 
 0.576
PRSS56
Serine protease 56; Belongs to the peptidase S1 family.
    
 
 0.561
SLC6A3
Solute carrier family 6 member 3.
   
  
 0.550
PAX5
Paired box 5.
    
 
 0.540
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.