STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM18RNA binding motif protein 18. (190 aa)    
Predicted Functional Partners:
BEX5
Brain expressed X-linked 5.
      
 0.515
RNF151
Ring finger protein 151.
   
 
 0.510
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
   
  
 0.501
NT5C
5', 3'-nucleotidase, cytosolic.
   
  
 0.491
POLR3F
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
  
 0.483
PCGF6
Polycomb group ring finger 6.
   
  
 0.482
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.480
CMTR1
Cap methyltransferase 1.
      
 0.479
RBM22
RNA binding motif protein 22.
   
  
 0.468
EXOC8
Exocyst complex component 8.
   
  
 0.447
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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