STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX40DEAH-box helicase 40. (857 aa)    
Predicted Functional Partners:
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
   
 
 0.878
ADM2
Adrenomedullin 2.
      
 0.854
BYSL
Bystin like.
   
 
 0.730
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 
 0.720
WDR36
WD repeat domain 36.
   
 
 0.714
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 
 0.708
UTP6
UTP6 small subunit processome component.
   
 
 0.686
UTP3
UTP3, small subunit processome component.
   
 
 0.679
NOL6
Nucleolar protein 6.
   
 
 0.677
UTP14A
Uncharacterized protein.
   
 
 0.671
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.