STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD3RNA pseudouridine synthase D3. (352 aa)    
Predicted Functional Partners:
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.944
PUS7
Pseudouridine synthase 7.
    
 
 0.925
PUS1
Pseudouridine synthase 1.
  
  
 0.918
TRUB2
TruB pseudouridine synthase family member 2.
  
 
 0.906
PUS3
Pseudouridine synthase 3.
  
  
 0.902
PUS10
Pseudouridine synthase 10.
      
 0.832
RPUSD1
RNA pseudouridine synthase domain containing 1.
      
 0.825
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.814
NGRN
Neugrin, neurite outgrowth associated.
    
 
 0.800
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.786
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.