Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC2D2A | CEP290 | ENSCAFP00000043808 | ENSCAFP00000054723 | Coiled-coil and C2 domain containing 2A. | Centrosomal protein 290. | 0.847 |
CC2D2A | NPHP4 | ENSCAFP00000043808 | ENSCAFP00000028853 | Coiled-coil and C2 domain containing 2A. | Nephrocystin 4. | 0.664 |
CC2D2A | OFD1 | ENSCAFP00000043808 | ENSCAFP00000059196 | Coiled-coil and C2 domain containing 2A. | OFD1 centriole and centriolar satellite protein. | 0.535 |
CC2D2A | PDE6D | ENSCAFP00000043808 | ENSCAFP00000016354 | Coiled-coil and C2 domain containing 2A. | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes (By similarity). Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location (By similarity). Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E (By similarity). Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI) (By similarity). Increases the affinity of ARL3 for GTP by several order [...] | 0.514 |
CC2D2A | RPGR | ENSCAFP00000043808 | ENSCAFP00000037530 | Coiled-coil and C2 domain containing 2A. | X-linked retinitis pigmentosa GTPase regulator; Could be a guanine-nucleotide releasing factor. Plays a role in ciliogenesis. Probably regulates cilia formation by regulating actin stress filaments and cell contractility. May be involved in microtubule organization and regulation of transport in primary cilia. Plays an important role in photoreceptor integrity. May play a critical role in spermatogenesis and in intraflagellar transport processes. | 0.778 |
CC2D2A | RPGRIP1 | ENSCAFP00000043808 | ENSCAFP00000008241 | Coiled-coil and C2 domain containing 2A. | RPGR-interacting protein 1. | 0.588 |
CC2D2A | RPGRIP1L | ENSCAFP00000043808 | ENSCAFP00000041439 | Coiled-coil and C2 domain containing 2A. | RPGRIP1 like. | 0.838 |
CEP290 | CC2D2A | ENSCAFP00000054723 | ENSCAFP00000043808 | Centrosomal protein 290. | Coiled-coil and C2 domain containing 2A. | 0.847 |
CEP290 | NPHP4 | ENSCAFP00000054723 | ENSCAFP00000028853 | Centrosomal protein 290. | Nephrocystin 4. | 0.888 |
CEP290 | OFD1 | ENSCAFP00000054723 | ENSCAFP00000059196 | Centrosomal protein 290. | OFD1 centriole and centriolar satellite protein. | 0.696 |
CEP290 | PDE6B | ENSCAFP00000054723 | ENSCAFP00000024683 | Centrosomal protein 290. | Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta; This protein participates in processes of transmission and amplification of the visual signal. Necessary for the formation of a functional phosphodiesterase holoenzyme; Belongs to the cyclic nucleotide phosphodiesterase family. | 0.568 |
CEP290 | PDE6D | ENSCAFP00000054723 | ENSCAFP00000016354 | Centrosomal protein 290. | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes (By similarity). Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location (By similarity). Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E (By similarity). Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI) (By similarity). Increases the affinity of ARL3 for GTP by several order [...] | 0.510 |
CEP290 | RPE65 | ENSCAFP00000054723 | ENSCAFP00000030301 | Centrosomal protein 290. | Retinoid isomerohydrolase; Critical isomerohydrolase in the retinoid cycle involved in regeneration of 11-cis-retinal, the chromophore of rod and cone opsins. Catalyzes the cleavage and isomerization of all-trans-retinyl fatty acid esters to 11-cis-retinol which is further oxidized by 11-cis retinol dehydrogenase to 11-cis-retinal for use as visual chromophore. Essential for the production of 11-cis retinal for both rod and cone photoreceptors. Also capable of catalyzing the isomerization of lutein to meso-zeaxanthin an eye-specific carotenoid. The soluble form binds vitamin A (all-tra [...] | 0.812 |
CEP290 | RPGR | ENSCAFP00000054723 | ENSCAFP00000037530 | Centrosomal protein 290. | X-linked retinitis pigmentosa GTPase regulator; Could be a guanine-nucleotide releasing factor. Plays a role in ciliogenesis. Probably regulates cilia formation by regulating actin stress filaments and cell contractility. May be involved in microtubule organization and regulation of transport in primary cilia. Plays an important role in photoreceptor integrity. May play a critical role in spermatogenesis and in intraflagellar transport processes. | 0.856 |
CEP290 | RPGRIP1 | ENSCAFP00000054723 | ENSCAFP00000008241 | Centrosomal protein 290. | RPGR-interacting protein 1. | 0.937 |
CEP290 | RPGRIP1L | ENSCAFP00000054723 | ENSCAFP00000041439 | Centrosomal protein 290. | RPGRIP1 like. | 0.906 |
NPHP4 | CC2D2A | ENSCAFP00000028853 | ENSCAFP00000043808 | Nephrocystin 4. | Coiled-coil and C2 domain containing 2A. | 0.664 |
NPHP4 | CEP290 | ENSCAFP00000028853 | ENSCAFP00000054723 | Nephrocystin 4. | Centrosomal protein 290. | 0.888 |
NPHP4 | OFD1 | ENSCAFP00000028853 | ENSCAFP00000059196 | Nephrocystin 4. | OFD1 centriole and centriolar satellite protein. | 0.560 |
NPHP4 | PDE6B | ENSCAFP00000028853 | ENSCAFP00000024683 | Nephrocystin 4. | Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta; This protein participates in processes of transmission and amplification of the visual signal. Necessary for the formation of a functional phosphodiesterase holoenzyme; Belongs to the cyclic nucleotide phosphodiesterase family. | 0.516 |
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