STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX56DEAD-box helicase 56. (454 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.973
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.960
DDX24
DEAD-box helicase 24.
  
 
0.943
RBM28
RNA binding motif protein 28.
   
 
 0.929
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.916
NOP58
NOP58 ribonucleoprotein.
  
 
 0.915
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.913
WDR74
WD repeat domain 74.
   
 
 0.910
CEP152
Centrosomal protein 152.
   
 
 0.910
WDR75
WD repeat domain 75.
   
 
 0.909
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.