STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J9NXK3_CANLFUncharacterized protein. (194 aa)    
Predicted Functional Partners:
WDR33
WD repeat domain 33.
    
 
 0.774
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 
 0.771
SYMPK
Symplekin.
   
 
 0.767
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.766
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 
 0.765
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 
 0.759
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 
 0.752
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 
 0.741
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 
 0.734
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.723
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.