STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC57Coiled-coil domain containing 57. (1020 aa)    
Predicted Functional Partners:
FASN
Fatty acid synthase.
 
 
  
 0.611
OR6K6
Olfactory receptor.
      
 0.515
SAC3D1
SAC3 domain containing 1.
   
 
 0.513
EML3
EMAP like 3.
    
 
 0.509
CCDC138
Coiled-coil domain containing 138.
    
 
 0.496
GLT6D1
Glycosyltransferase 6 domain containing 1.
   
  
 0.485
HID1
HID1 domain containing.
      
 0.483
TMEM71
Transmembrane protein 71.
      
 0.483
WDR83
WD repeat domain 83.
    
 
 0.474
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
   
  
 0.463
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.