STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL8A2Collagen type VIII alpha 2 chain. (698 aa)    
Predicted Functional Partners:
SLC4A11
Solute carrier family 4 member 11.
      
 0.861
COL8A1
Collagen type VIII alpha 1 chain.
  
0.856
COL14A1
Collagen type XIV alpha 1 chain.
  
 
0.766
CYYR1
Cysteine and tyrosine rich 1.
   
  
 0.746
KANK4
KN motif and ankyrin repeat domains 4.
    
 
 0.700
AGBL1
ATP/GTP binding protein like 1.
      
 0.686
COL26A1
Collagen type XXVI alpha 1 chain.
     
 0.674
COL20A1
Collagen type XX alpha 1 chain.
  
  
0.673
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.672
PLOD1
Fe2OG dioxygenase domain-containing protein.
   
 0.659
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.