STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102154527NTR domain-containing protein. (221 aa)    
Predicted Functional Partners:
GAN
Gigaxonin.
      
 0.673
XXYLT1
Xyloside xylosyltransferase 1.
      
 0.650
MMP9
Matrix metalloproteinase-9; Could play a role in bone osteoclastic resorption. Cleaves type IV and type V collagen into large C-terminal three quarter fragments and shorter N-terminal one quarter fragments (By similarity).
    
 0.606
ADAM10
ADAM metallopeptidase domain 10.
    
 0.587
FAM43A
Family with sequence similarity 43 member A.
      
 0.526
BCO1
Beta-carotene oxygenase 1.
      
 0.515
FAM20C
FAM20C golgi associated secretory pathway kinase.
     
  0.499
SPP1
Secreted phosphoprotein 1.
   
 
 0.478
CSF1
Colony stimulating factor 1.
   
 
 0.458
FGF23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
   
 
 0.441
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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