STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGB4High mobility group box 4. (228 aa)    
Predicted Functional Partners:
IQCF1
IQ motif containing F1.
   
 
 0.714
CCDC181
Coiled-coil domain containing 181.
      
 0.713
ANKRD9
Ankyrin repeat domain 9.
    
 
 0.712
RASSF3
Ras association domain family member 3.
   
  
 0.707
ZBTB34
Zinc finger and BTB domain containing 34.
    
 
 0.684
ENTHD1
ENTH domain containing 1.
      
 0.647
SOX4
Transcription factor SOX.
    
 
 0.600
NACC2
NACC family member 2.
   
 
 0.580
RPS28
Ribosomal protein S28.
   
 
 0.580
MEIOB
Meiosis specific with OB-fold.
    
 
 0.575
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.