STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMCO1Single-pass membrane protein with coiled-coil domains 1. (214 aa)    
Predicted Functional Partners:
ZDHHC19
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.871
UBXN7
UBX domain-containing protein 7.
      
 0.871
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha.
      
 0.846
PIGX
Phosphatidylinositol glycan anchor biosynthesis class X.
      
 0.809
SLC51A
Solute carrier family 51 alpha subunit.
      
 0.804
CEP19
Centrosomal protein 19.
      
 0.800
TM4SF19
Uncharacterized protein.
      
 0.789
FBXO45
F-box protein 45.
      
 0.707
RNF168
Ring finger protein 168.
 
    
 0.706
TNK2
Tyrosine kinase non receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.671
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (24%) [HD]