STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2H16orf78Chromosome 2 C16orf78 homolog. (263 aa)    
Predicted Functional Partners:
EFCAB10
EF-hand calcium binding domain 10.
   
  
 0.547
STPG2
Sperm tail PG-rich repeat containing 2.
      
 0.534
PRODH2
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
      
 0.515
DEFB125
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.515
CFAP206
Cilia and flagella associated protein 206.
      
 0.508
DENND3
DENN domain containing 3.
      
 0.487
TAFA1
TAFA chemokine like family member 1.
      
 0.483
RINT1
RAD50 interactor 1.
      
 0.482
MAN1C1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.454
MRPS30
Mitochondrial ribosomal protein S30.
      
 0.453
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.