STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRBV25-1T cell receptor beta variable 25-1. (122 aa)    
Predicted Functional Partners:
PIGV
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
      
 0.521
CLCA4
Chloride channel accessory 4.
   
 
 0.465
E2RKE1_CANLF
Ig-like domain-containing protein.
  
 
 
 0.457
DLA-DRA
Ig-like domain-containing protein; Belongs to the MHC class II family.
    
   0.453
ENSCAFP00000049670
Ig-like domain-containing protein.
  
 
   0.441
FAM3D
Family with sequence similarity 3 member D.
      
 0.433
J9NXD9_CANLF
Ig-like domain-containing protein.
  
 
 
 0.423
F1PK42_CANLF
Ig-like domain-containing protein.
  
 
   0.421
RPL37A
Ribosomal protein L37a.
      
 0.410
F1PP29_CANLF
Uncharacterized protein.
  
 
   0.403
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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