LOC100685462 protein (Canis lupus familiaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC100685462

Uncharacterized protein. (610 aa)

Predicted Functional Partners:

ANAPC11

0.603

FGGY

0.582

TSPAN9

0.548

RBM22

0.515

GAS7

0.498

ELOVL2

0.490

UBAP1

0.483

ENSCAFP00000048438

0.483

RAB4A

0.482

RMI1

0.481

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANAPC11	ELOVL2	ENSCAFP00000008791	ENSCAFP00000014334	Anaphase promoting complex subunit 11.	Elongation of very long chain fatty acids protein 2; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C20:4(n-6) acyl-CoA. Condensing enzyme that catalyzes the synthesis of polyunsaturated very long chain fatty acid (C20- and C22-PUFA). May participate to the production [...]	0.485
ANAPC11	ENSCAFP00000048438	ENSCAFP00000008791	ENSCAFP00000048438	Anaphase promoting complex subunit 11.	UMA domain-containing protein.	0.471
ANAPC11	FGGY	ENSCAFP00000008791	ENSCAFP00000061430	Anaphase promoting complex subunit 11.	FGGY carbohydrate kinase domain containing.	0.567
ANAPC11	GAS7	ENSCAFP00000008791	ENSCAFP00000046168	Anaphase promoting complex subunit 11.	Growth arrest specific 7.	0.489
ANAPC11	LOC100685462	ENSCAFP00000008791	ENSCAFP00000039574	Anaphase promoting complex subunit 11.	Uncharacterized protein.	0.603
ANAPC11	RAB4A	ENSCAFP00000008791	ENSCAFP00000047005	Anaphase promoting complex subunit 11.	RAB4A, member RAS oncogene family.	0.519
ANAPC11	RBM22	ENSCAFP00000008791	ENSCAFP00000026732	Anaphase promoting complex subunit 11.	RNA binding motif protein 22.	0.613
ANAPC11	RMI1	ENSCAFP00000008791	ENSCAFP00000001985	Anaphase promoting complex subunit 11.	RecQ mediated genome instability 1.	0.677
ANAPC11	TSPAN9	ENSCAFP00000008791	ENSCAFP00000048952	Anaphase promoting complex subunit 11.	Tetraspanin.	0.517
ANAPC11	UBAP1	ENSCAFP00000008791	ENSCAFP00000002800	Anaphase promoting complex subunit 11.	Uncharacterized protein.	0.471
ELOVL2	ANAPC11	ENSCAFP00000014334	ENSCAFP00000008791	Elongation of very long chain fatty acids protein 2; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C20:4(n-6) acyl-CoA. Condensing enzyme that catalyzes the synthesis of polyunsaturated very long chain fatty acid (C20- and C22-PUFA). May participate to the production [...]	Anaphase promoting complex subunit 11.	0.485
ELOVL2	LOC100685462	ENSCAFP00000014334	ENSCAFP00000039574	Elongation of very long chain fatty acids protein 2; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C20:4(n-6) acyl-CoA. Condensing enzyme that catalyzes the synthesis of polyunsaturated very long chain fatty acid (C20- and C22-PUFA). May participate to the production [...]	Uncharacterized protein.	0.490
ELOVL2	RBM22	ENSCAFP00000014334	ENSCAFP00000026732	Elongation of very long chain fatty acids protein 2; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C20:4(n-6) acyl-CoA. Condensing enzyme that catalyzes the synthesis of polyunsaturated very long chain fatty acid (C20- and C22-PUFA). May participate to the production [...]	RNA binding motif protein 22.	0.412
ELOVL2	RMI1	ENSCAFP00000014334	ENSCAFP00000001985	Elongation of very long chain fatty acids protein 2; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C20:4(n-6) acyl-CoA. Condensing enzyme that catalyzes the synthesis of polyunsaturated very long chain fatty acid (C20- and C22-PUFA). May participate to the production [...]	RecQ mediated genome instability 1.	0.483
ENSCAFP00000048438	ANAPC11	ENSCAFP00000048438	ENSCAFP00000008791	UMA domain-containing protein.	Anaphase promoting complex subunit 11.	0.471
ENSCAFP00000048438	FGGY	ENSCAFP00000048438	ENSCAFP00000061430	UMA domain-containing protein.	FGGY carbohydrate kinase domain containing.	0.455
ENSCAFP00000048438	LOC100685462	ENSCAFP00000048438	ENSCAFP00000039574	UMA domain-containing protein.	Uncharacterized protein.	0.483
ENSCAFP00000048438	RBM22	ENSCAFP00000048438	ENSCAFP00000026732	UMA domain-containing protein.	RNA binding motif protein 22.	0.500
ENSCAFP00000048438	RMI1	ENSCAFP00000048438	ENSCAFP00000001985	UMA domain-containing protein.	RecQ mediated genome instability 1.	0.465
FGGY	ANAPC11	ENSCAFP00000061430	ENSCAFP00000008791	FGGY carbohydrate kinase domain containing.	Anaphase promoting complex subunit 11.	0.567