STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS18L1SS18L1 subunit of BAF chromatin remodeling complex. (401 aa)    
Predicted Functional Partners:
DPF2
Double PHD fingers 2.
    
 
 0.885
CWF19L1
CWF19 like 1, cell cycle control.
      
 0.873
DPF1
Double PHD fingers 1.
    
 
 0.809
DPF3
Double PHD fingers 3.
   
 
 0.786
SMARCD1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
   
 
 0.773
BCL7B
BAF chromatin remodeling complex subunit BCL7B.
    
 
 0.764
PHF10
PHD finger protein 10.
    
 
 0.757
RFX6
Regulatory factor X6.
   
 
 0.745
RFX7
Regulatory factor X7.
   
  
 0.741
BCL7A
BAF chromatin remodeling complex subunit BCL7A.
    
 
 0.708
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.