STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMDEmerin. (260 aa)    
Predicted Functional Partners:
ENSCAFP00000050943
Uncharacterized protein.
    
 0.996
LMNA
Uncharacterized protein; Belongs to the intermediate filament family.
   
 0.996
LMNB1
Lamin B1; Belongs to the intermediate filament family.
   
 0.983
LBR
Lamin B receptor.
   
 
 0.957
LMNB2
Lamin B2; Belongs to the intermediate filament family.
   
 
 0.921
SUN2
Sad1 and UNC84 domain containing 2.
    
 
 0.889
SUN1
Sad1 and UNC84 domain containing 1.
    
 
 0.879
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 
 0.857
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
   
 
 0.853
RBM39
RNA binding motif protein 39.
   
 
 0.840
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.