STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMOtRNA methyltransferase O. (481 aa)    
Predicted Functional Partners:
SLAIN2
SLAIN motif family member 2.
   
  
 0.647
CDKAL1
CDK5 regulatory subunit-associated protein 1-like 1.
  
  
 0.563
EXOC7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.562
MINDY2
MINDY lysine 48 deubiquitinase 2.
      
 0.517
GOLGA7
Golgin A7.
      
 0.515
GON7
GON7 subunit of KEOPS complex.
      
 0.515
TSEN15
tRNA splicing endonuclease subunit 15.
      
 0.515
TANGO2
Transport and golgi organization 2 homolog.
      
 0.515
NPL
N-acetylneuraminate pyruvate lyase; Belongs to the DapA family.
      
 0.509
COX18
Cytochrome c oxidase assembly factor COX18.
   
  
 0.498
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.