STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX16Sorting nexin 16. (315 aa)    
Predicted Functional Partners:
VPS26A
VPS26, retromer complex component A.
   
 
 0.701
SNX2
Sorting nexin 2.
   
  
 0.554
SNX4
Sorting nexin 4.
   
  
 0.545
SNX13
Sorting nexin 13.
   
  
 0.524
COMMD9
COMM domain containing 9.
      
 0.516
AP5Z1
Adaptor related protein complex 5 subunit zeta 1.
      
 0.516
FCHSD2
FCH and double SH3 domains 2.
    
 
 0.514
SLC49A4
Solute carrier family 49 member 4.
   
  
 0.507
DCDC2B
Doublecortin domain containing 2B.
      
 0.495
SNX15
Sorting nexin 15.
      
 0.491
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.