STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEGNBSPEG neighbor. (238 aa)    
Predicted Functional Partners:
TCAP
Titin-cap.
   
 
 0.597
ACTN2
Actinin alpha 2.
   
 
 0.582
CALML6
Calmodulin like 6.
  
 
 
 0.534
OBSL1
Obscurin like 1.
   
 
0.477
ENSCAFP00000051866
Uncharacterized protein.
   
 
0.477
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 
 0.464
WDR18
WD repeat domain 18.
   
 
 0.462
TRIM63
Tripartite motif containing 63.
   
 
 0.455
MYL1
Myosin light chain 1.
   
 
 0.440
TEX10
Testis expressed 10.
   
 
 0.418
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.