STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL15A1Collagen type XV alpha 1 chain. (1477 aa)    
Predicted Functional Partners:
P3H2
Prolyl 3-hydroxylase 2.
   
 
 0.686
COL6A1
Collagen type VI alpha 1 chain.
  
0.659
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.648
COL4A1
Collagen type IV alpha 1 chain.
   
0.640
COL8A1
Collagen type VIII alpha 1 chain.
  
0.637
COL21A1
Collagen type XXI alpha 1 chain.
   
0.629
PLOD1
Fe2OG dioxygenase domain-containing protein.
   
 0.628
COL1A1
Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen).
  
0.628
COL17A1
120 kDa linear IgA disease antigen homolog; The 120 kDa linear IgA disease antigen homolog is an anchoring filament component involved in dermal-epidermal cohesion.
  
0.621
COL5A3
Collagen type V alpha 3 chain.
  
0.620
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.