STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMERB1BMERB domain containing 1. (303 aa)    
Predicted Functional Partners:
MAP7D2
MAP7 domain containing 2.
      
 0.603
LIMS2
LIM zinc finger domain containing 2.
   
  
 0.523
HSPH1
Heat shock protein family H (Hsp110) member 1.
   
  
 0.507
FSTL3
Follistatin like 3.
      
 0.497
FOPNL
FGFR1OP N-terminal like.
      
 0.432
TUBB6
Tubulin beta 6 class V; Belongs to the tubulin family.
   
  
 0.411
PDIA4
Protein disulfide isomerase family A member 4; Belongs to the protein disulfide isomerase family.
      
 0.407
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.