STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J9P6F4_CANLFKRAB domain-containing protein. (217 aa)    
Predicted Functional Partners:
SGSM3
Small G protein signaling modulator 3.
      
 0.769
RAB3IP
RAB3A interacting protein.
    
 
 0.717
ERLIN2
ER lipid raft associated 2.
   
  
 0.638
NRF1
Nuclear respiratory factor 1.
   
 
 0.609
SP100
SP100 nuclear antigen.
   
 
 0.577
ZNF213
Zinc finger protein 213.
 
  
 
 0.521
ATP13A1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
    
 
 0.490
ZNF282
Zinc finger protein 282.
   
 
0.482
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
 
 0.481
BRPF1
Bromodomain and PHD finger containing 1.
   
 
 0.458
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.